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Vina-FPGA2: a high-level parallelized hardware-accelerated molecular docking tool based on the inter-module pipeline
Regular Papers | Updated：2026-01-07

    • Vina-FPGA2: a high-level parallelized hardware-accelerated molecular docking tool based on the inter-module pipeline

      Enhanced Publication
    • Vina-FPGA2：基于模块间流水线的高层级并行硬件加速的分子对接工具
    • “In the field of molecular docking, Vina-FPGA2, an inter-module pipeline design, further accelerates Vina-FPGA. Expert proposed Vina-FPGA2-Enhanced, which achieves an average 12.6× performance improvement over CPU and a 3.3× improvement over Vina-FPGA.”
    • Frontiers of Information Technology & Electronic Engineering   Vol. 26, Issue 11, Pages: 2215-2230(2025)

    • DOI：10.1631/FITEE.2400941    

      CLC： TP332.1

    • Received：22 October 2024，

      Revised：2025-09-28，

      Published Online：03 December 2025，

      Published：2025-11

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  • Ming LING, Shidi TANG, Ruiqi CHEN, et al. Vina-FPGA2: a high-level parallelized hardware-accelerated molecular docking tool based on the inter-module pipeline[J]. Frontiers of Information Technology & Electronic Engineering, 2025, 26(11): 2215-2230. DOI： 10.1631/FITEE.2400941.

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